NEMoE class

NEMoE class

Slots

Microbiome

A list of microbiome matrix, rows are samples.

Nutrition

A matrix of nutrition intake.

Response

A vector of health outcome.

params

A list of parameters for fitting NEMoE.

K

A number of fitting componenets in NEMoE (>=2).

cvParams

A list of parameters for selecting parameters of NEMoE using cross validation.

cvResult

A dataframe of cross validation results of different parameters of fitting NEMoE.

NEMoE_output

A list NEMoE fitting result.

taxLevel

A character indicates selected taxa level.

ResponseLevel

A character indicates levels of response variables.

standardize

A Logical variable indicate whether standardize input data.