Preprocessing the the reference scRNA-seq data

processingRef(sce_ref, celltype, subset_row = NULL)

Arguments

sce_ref

A SingleCellExperiment object

celltype

A vector indicating cell type information.

subset_row

A vector specifying the subset of features to keep for the reference data. This can be a character vector of row names, an integer vector of row indices or a logical vector.

Value

A SingleCellExperiment object