A SingleCellExperiment of ECCITE-seq data

Source: R/data.R

Data from Mimitou et al. ECCITE-seq PBMC CTCL sample data

data(sce_ctcl_subset, package = 'CiteFuse')

Format

An object of class SingleCellExperiment with 1450 rows and 173 columns.

Source

Gene Expression Omnibus with the accession code GSE126310.

References

Mimitou, E. P., Cheng, A., Montalbano, A., et al. (2019). Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells. Nature Methods, 16(5), 409–412.