Function reference • CiteFuse

All functions
`CITEseq_example`	A subset of ECCITE-seq data (control)
`CiteFuse()`	CiteFuse
`DEbubblePlot()`	DEbubblePlot
`DEcomparisonPlot()`	DEcomparisonPlot
`DEgenes()`	DEgenes
`DEgenesCross()`	DEgenesCross
`crossSampleDoublets()`	crossSampleDoublets
`geneADTnetwork()`	geneADTnetwork
`igraphClustering()`	igraphClustering
`importanceADT()`	importanceADT
`ligandReceptorTest()`	ligandReceptorTest
`lr_pair_subset`	A subset of Ligand Receptor Pairs
`normaliseExprs()`	normaliseExprs
`plotHTO()`	plotHTO
`plotHTOSingle()`	plotHTOSingle
`preprocessing()`	A function to preprocess the list of expression matrix
`readFrom10X()`	readFrom10X
`reducedDimSNF()`	reducedDimSNF
`sce_control_subset`	A SingleCellExperiment of ECCITE-seq data
`sce_ctcl_subset`	A SingleCellExperiment of ECCITE-seq data
`selectDEgenes()`	selectDEgenes
`spectralClustering()`	spectralClustering
`visImportance()`	visImportance
`visLigandReceptor()`	visLigandReceptor
`visualiseDim()`	visualiseDim
`visualiseExprs()`	visualiseExprs
`visualiseExprsList()`	visualiseExprsList
`visualiseKNN()`	visualiseKNN
`withinSampleDoublets()`	withinSampleDoublets

Reference