Single cell differential composition analysis • scDC

scDC is a package to perform differential composition analysis on scRNA-seq data.

Installation

## Some CRAN packages required by scDC
install.packages(c("parallel", "DescTools", "lme4", "reshape2", "ggridges", 
"lme4", "mice"))

## Some BioConductor packages required by scDC
BiocManager::install(c("scran"))

## Some Github packages required by scDC
devtools::install_github("taiyunkim/scClustBench")


## Installing scDC 
devtools::install_github("SydneyBioX/scDC")