Package index
-
adaptiveSmoothing()
- Adaptive smoothing
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clustSIGNAL()
- ClustSIGNAL
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.exp_kernel()
- Exponential distribution weights
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.gauss_kernel()
- Gaussian distribution weights
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.generateBPParam()
- Generating BPParam object
-
entropyMeasure()
- Domainness measure
-
example
- Example data as SpatialExperiment object
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mEmbryo2
- Mouse Embryo Data
-
mHypothal
- Mouse Hypothalamus Data
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neighbourDetect()
- Cell neighbourhood detection
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p1_clustering()
- Initial non-spatial clustering
-
p2_clustering()
- Final non-spatial clustering