Package index
-
ARImetric() - Adjusted Rand Index (ARI) Metric
-
BenchmarkInsights - A BenchmarkInsights object
-
BenchmarkStudy - BenchmarkStudy Class
-
JSDmetric() - Jensen-Shannon Divergence (JSD) Metric
-
MCCmetric() - Matthews Correlation Coefficient (MCC) Metric
-
MSEmetric() - Mean Squared Error (MSE) Metric
-
NMImetric() - Normalized Mutual Information (NMI) Metric
-
RMSEmetric() - Root Mean Squared Error (RMSE) Metric
-
Trio - A Trio object
-
balAccMetric() - Balanced Accuracy Metric
-
balErrMetric() - Balanced Error Metric
-
beggCIndexMetric() - Begg's C-Index Metric
-
brierScoreMetric() - Brier Score Metric
-
buildDatasetEvidenceSubmission() - Build DatasetEvidence submission rows from a Trio object
-
buildDatasetSubmission() - Build a Dataset submission row from a Trio object
-
buildDatasetTaskMetricSubmission() - Build DatasetTaskMetric submission rows from a Trio object
-
buildDatasetTaskSubmission() - Build DatasetTask submission rows from a Trio object
-
buildMetricSubmission() - Build Metric submission rows from a Trio object
-
buildTrioSubmission() - Build a combined Trio submission object
-
buildTrioSubmissionPayload() - Convert a combined Trio submission to payload structure
-
collectDatasetSubmissionInfo() - Collect Dataset submission metadata interactively
-
collectDatasetTaskMetricSubmission() - Collect DatasetTaskMetric submission rows from Trio assignments
-
collectEvidenceSubmissionInfo() - Collect DatasetEvidence submission metadata interactively
-
collectMetricSubmissionInfo() - Collect Metric submission metadata interactively
-
collectTaskSubmissionInfo() - Collect DatasetTask submission metadata interactively
-
downloadSubmissionTrio() - Download a Trio from the five-table submission database
-
ghCIndexMetric() - GH C-Index Metric
-
harrelCIndexMetric() - Harrel's C-Index Metric
-
kdeMetric() - Kernel Density Estimation (KDE) Metric
-
listCuratedTrioDatasets() - List the curated Trio datasets
-
listCuratedTrioStudies() - List the curated Trio studies
-
lubomski_microbiome_dataxlubomPD - Human Gut Microbiome Abundance and Patient Classes
-
macroF1Metric() - Macro F1 Score Metric
-
macroPrecMetric() - Macro Precision Metric
-
macroRecMetric() - Macro Recall Metric
-
microF1Metric() - Micro F1 Score Metric
-
microPrecMetric() - Micro Precision Metric
-
microRecMetric() - Micro Recall Metric
-
prepareTrioSubmissionBundle() - Build a pre-submit Trio submission bundle
-
prepareTrioSubmissionFiles() - Prepare Trio files and download metadata for submission
-
prepareTrioSubmissionMetrics() - Prepare Trio metric metadata for submission
-
submitTrioSubmission() - Submit a Trio submission payload to Google Apps Script
-
timeDependentAUCMetric() - Time-Dependent AUC Metric
-
trioSubmissionToJSON() - Convert a combined Trio submission to JSON
-
unoCIndexMetric() - Uno's C-Index Metric
-
writeSubmission() - Interactively prepare a Trio submission bundle