Build a pre-submit Trio submission bundle

This is the higher-level R interface for the new submission workflow. It can prepare dataset/evidence files, prepare metric metadata, build the five-table submission object, and return the payload/JSON for inspection before calling submitTrioSubmission().

Usage

prepareTrioSubmissionBundle(
  trio,
  dataset_args,
  task_args,
  evidence_task_map,
  prepare_files = FALSE,
  file_args = list(),
  prepare_metrics = FALSE,
  metric_args = list(),
  build_payload = TRUE,
  build_json = FALSE
)

Arguments

trio

A Trio object.

dataset_args

Named list passed to buildDatasetSubmission().

task_args

Named list passed to buildDatasetTaskSubmission().

evidence_task_map

Named character vector mapping Trio evidence names to submission task names.

prepare_files

Logical; if TRUE, call prepareTrioSubmissionFiles().

file_args

Named list of additional arguments for prepareTrioSubmissionFiles(), excluding trio.

prepare_metrics

Logical; if TRUE, call prepareTrioSubmissionMetrics().

metric_args

Named list of additional arguments for prepareTrioSubmissionMetrics(), excluding trio.

build_payload

Logical; if TRUE, attach the nested payload structure.

build_json

Logical; if TRUE, attach the JSON string.

Value

A named list containing the built submission, plus optional files, metrics, payload, and json.