Aizarani et al. Human Liver Data

Yingxin Lin

Train Model

## Class: scClassifyTrainModel 
## Model name: Aizarani_liver 
## Feature selection methods: limma 
## Number of cells in the training data: 10326 
## Number of cell types in the training data: 9

Cell type composition:

Cell Tpye	Freq
B	244
cholangiocytes	1022
Hepatocytes	3086
kupffer cells	1050
liver sinusoidal endothelial cells	1361
macrovascular endothelial cells	355
Other endothelial cells	114
Stellate cells and myofibroblasts	28
T/NK	3066

Visualisation

tSNE

Cell Type Tree

Reference

Aizarani, N. et al., 2019. A human liver cell atlas reveals heterogeneity and epithelial progenitors. Nature.