Segerstolpe et al. Human Pancreas Data

Yingxin Lin

Train Model

## Class: scClassifyTrainModel 
## Model name: segerstolpe_HumanPancreas 
## Feature selection methods: limma DV DD chisq BI 
## Number of cells in the training data: 2127 
## Number of cell types in the training data: 11

Cell type composition:

Cell Tpye	Freq
acinar	185
alpha	886
beta	270
delta	114
ductal	386
endothelial	16
epsilon	7
gamma	197
mast	7
MHC class II	5
stellate	54

Visualisation

tSNE

Cell Type Tree

Reference

Segerstolpe, Å. et al., 2016. Single-Cell Transcriptome Profiling of Human Pancreatic Islets in Health and Type 2 Diabetes. Cell Metabolism.